Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb3 | SAMN04488094_1393 | Not Available | Negative | 4943027 - 4943305 | 10318.9 |
| type iv secretion system protein virb2 | SAMN04488094_1394 | Not Available | Negative | 4943298 - 4943591 | 10014.6 |
| transglycosylase slt domain-containing protein | SAMN04488094_1395 | Not Available | Negative | 4943588 - 4944202 | 21648.6 |
| hypothetical protein | SAMN04488094_1396 | Not Available | Negative | 4944246 - 4944614 | 13502.1 |
| hypothetical protein | SAMN04488094_1397 | Not Available | Positive | 4944783 - 4945012 | 8669.53 |
| protein of unknown function | SAMN04488094_1401 | Not Available | Negative | 4945013 - 4946552 | 57594.8 |
| hypothetical protein | SAMN04488094_1402 | Not Available | Negative | 4946562 - 4946828 | 9608.14 |
| hypothetical protein | SAMN04488094_1403 | Not Available | Positive | 4947028 - 4947333 | 11048.0 |
| antitoxin pard1/3/4 | SAMN04488094_1404 | Not Available | Positive | 4947384 - 4947635 | 9149.89 |
| toxin pare1/3/4 | SAMN04488094_1405 | Not Available | Positive | 4947628 - 4947927 | 11496.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
