Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb11 | SAMN04488094_1357 | Not Available | Positive | 4916652 - 4917638 | 35946.3 |
| hypothetical protein | SAMN04488094_1358 | Not Available | Positive | 4917635 - 4917829 | 7055.39 |
| hypothetical protein | SAMN04488094_1359 | Not Available | Positive | 4917826 - 4918239 | 15410.3 |
| type iv secretion system protein virb6 | SAMN04488094_13510 | Not Available | Positive | 4918252 - 4918377 | 4329.13 |
| type iv secretion system protein virb6 | SAMN04488094_13511 | Not Available | Positive | 4918371 - 4919327 | 33094.1 |
| transposase, is4 family | SAMN04488094_13512 | Not Available | Negative | 4919810 - 4920141 | 12836.8 |
| fatty-acyl-coa synthase | SAMN04488094_1361 | Not Available | Positive | 4920490 - 4921902 | 51378.5 |
| transcriptional regulator, deor family | SAMN04488094_1362 | Not Available | Negative | 4922451 - 4923248 | 28975.6 |
| glycerol-3-phosphate dehydrogenase | SAMN04488094_1363 | Not Available | Negative | 4923459 - 4925075 | 57910.4 |
| glycerol uptake facilitator protein | SAMN04488094_1364 | Not Available | Positive | 4925704 - 4926411 | 23874.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
