Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative quinone oxidoreductase, yhdh/yhfp family | SAMN04488094_101274 | Not Available | Negative | 298567 - 299553 | 34820.2 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488094_101275 | Not Available | Negative | 299595 - 300101 | 18877.6 |
| rubrerythrin | SAMN04488094_101276 | Not Available | Negative | 300191 - 301168 | 35369.3 |
| Tmrna,resume consensus sequence (at 199): gatagttgccaatgacaa | Not Available | Not Available | Positive | 301357 - 301691 | Not Available |
| snoal-like polyketide cyclase | SAMN04488094_101278 | Not Available | Positive | 301811 - 302239 | 15783.1 |
| hypothetical protein | SAMN04488094_101279 | Not Available | Positive | 302446 - 302940 | 18511.2 |
| fumarase, class ii | SAMN04488094_101280 | Not Available | Positive | 303101 - 304501 | 50125.3 |
| gluconate:h+ symporter, gntp family | SAMN04488094_101281 | Not Available | Negative | 304593 - 305948 | 46161.7 |
| protein of unknown function | SAMN04488094_101282 | Not Available | Positive | 306331 - 306573 | 9042.72 |
| hint domain-containing protein | SAMN04488094_101283 | Not Available | Positive | 306718 - 307407 | 24349.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
