Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04488094_1333 | Not Available | Negative | 4893598 - 4894083 | 16585.8 |
| sulfoxide reductase catalytic subunit yedy | SAMN04488094_1334 | Not Available | Positive | 4894388 - 4895317 | 34507.0 |
| hypothetical protein | SAMN04488094_1335 | Not Available | Negative | 4895321 - 4895971 | 24084.7 |
| sulfoxide reductase heme-binding subunit yedz | SAMN04488094_1336 | Not Available | Positive | 4896076 - 4896711 | 23821.5 |
| Trna-ile | Not Available | Not Available | Positive | 4898899 - 4898975 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4898993 - 4899068 | Not Available |
| transposase | SAMN04488094_1341 | Not Available | Negative | 4902646 - 4902901 | 9213.07 |
| protein of unknown function | SAMN04488094_1342 | Not Available | Positive | 4903946 - 4904875 | 33718.1 |
| hypothetical protein | SAMN04488094_1343 | Not Available | Positive | 4905007 - 4906023 | 37170.5 |
| hypothetical protein | SAMN04488094_1344 | Not Available | Positive | 4906562 - 4906768 | 7684.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
