Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_1321 | Not Available | Negative | 4881139 - 4881417 | 10394.4 |
| hexameric tyrosine-coordinated heme protein (hthp) | SAMN04488094_1322 | Not Available | Negative | 4881414 - 4881647 | 8491.02 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN04488094_1323 | Not Available | Negative | 4881595 - 4881807 | 7704.25 |
| uncharacterized membrane protein | SAMN04488094_1324 | Not Available | Negative | 4881804 - 4882601 | 28590.4 |
| hypothetical protein | SAMN04488094_1325 | Not Available | Negative | 4882615 - 4882773 | 5381.72 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN04488094_1326 | Not Available | Negative | 4882770 - 4883687 | 32929.5 |
| cbb3-type cytochrome oxidase, subunit 3 | SAMN04488094_1327 | Not Available | Negative | 4883680 - 4883844 | 6059.43 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN04488094_1328 | Not Available | Negative | 4883841 - 4884569 | 26601.5 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN04488094_1329 | Not Available | Negative | 4884574 - 4886199 | 60143.3 |
| transcriptional regulator, badm/rrf2 family | SAMN04488094_13210 | Not Available | Negative | 4886219 - 4886635 | 15039.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
