Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylbilane synthase | SAMN04488094_13110 | Not Available | Negative | 4872631 - 4873593 | 34459.2 |
| uroporphyrinogen decarboxylase | SAMN04488094_13111 | Not Available | Positive | 4873699 - 4874739 | 37562.1 |
| uncharacterized membrane protein | SAMN04488094_13112 | Not Available | Negative | 4874743 - 4875603 | 29833.5 |
| uncharacterized conserved protein | SAMN04488094_13113 | Not Available | Negative | 4875755 - 4876222 | 17565.9 |
| protein n-acetyltransferase, rimj/riml family | SAMN04488094_13114 | Not Available | Negative | 4876258 - 4876983 | 27130.7 |
| coproporphyrinogen oxidase | SAMN04488094_13115 | Not Available | Negative | 4876974 - 4877864 | 32859.3 |
| hypothetical protein | SAMN04488094_13116 | Not Available | Positive | 4878051 - 4878440 | 14301.2 |
| 7-alpha-hydroxysteroid dehydrogenase | SAMN04488094_13117 | Not Available | Negative | 4878453 - 4879274 | 29090.6 |
| 16s rrna m(2)g 1207 methyltransferase | SAMN04488094_13118 | Not Available | Negative | 4879336 - 4880340 | 36000.7 |
| catechol 2,3-dioxygenase | SAMN04488094_13119 | Not Available | Negative | 4880437 - 4880829 | 13590.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
