Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_13020 | Not Available | Positive | 4865402 - 4865791 | 14571.8 |
| transposase, mutator family | SAMN04488094_1311 | Not Available | Positive | 4866133 - 4866407 | 10335.3 |
| protein of unknown function | SAMN04488094_1312 | Not Available | Positive | 4866956 - 4867213 | 9629.2 |
| Trna-arg | Not Available | Not Available | Positive | 4867837 - 4867913 | Not Available |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488094_1314 | Not Available | Negative | 4867971 - 4869377 | 50927.9 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN04488094_1315 | Not Available | Negative | 4869387 - 4870802 | 49817.2 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN04488094_1316 | Not Available | Negative | 4870806 - 4871537 | 25368.5 |
| lsu ribosomal protein l34p | SAMN04488094_1317 | Not Available | Positive | 4871827 - 4871961 | 5137.46 |
| ribonuclease p protein component | SAMN04488094_1318 | Not Available | Positive | 4871961 - 4872335 | 13373.2 |
| hypothetical protein | SAMN04488094_1319 | Not Available | Positive | 4872332 - 4872577 | 9061.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
