Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase, c-terminal domain | SAMN04488094_13010 | Not Available | Positive | 4857253 - 4858023 | 27559.8 |
| predicted oxidoreductase | SAMN04488094_13011 | Not Available | Positive | 4858020 - 4859006 | 35611.0 |
| n-ethylmaleimide reductase | SAMN04488094_13012 | Not Available | Positive | 4859196 - 4860290 | 38750.8 |
| hypothetical protein | SAMN04488094_13013 | Not Available | Negative | 4860416 - 4860607 | 7374.96 |
| transposase | SAMN04488094_13014 | Not Available | Negative | 4860690 - 4861877 | 43230.5 |
| transposase c of is166 homeodomain-containing protein | SAMN04488094_13015 | Not Available | Negative | 4861896 - 4862249 | 13125.2 |
| is66 orf2 like protein | SAMN04488094_13016 | Not Available | Negative | 4862305 - 4862583 | 10467.7 |
| is66 c-terminal element | SAMN04488094_13017 | Not Available | Positive | 4862644 - 4862829 | 6471.61 |
| transposase | SAMN04488094_13018 | Not Available | Positive | 4863029 - 4863403 | 14007.7 |
| putative transposase | SAMN04488094_13019 | Not Available | Positive | 4863400 - 4864167 | 29595.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
