Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488094_1298 | Not Available | Positive | 4841257 - 4842714 | 51908.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488094_1299 | Not Available | Positive | 4842711 - 4843679 | 35787.6 |
| glycosyl transferases group 1 | SAMN04488094_12910 | Not Available | Positive | 4843676 - 4844731 | 38032.6 |
| acyl-coa dehydrogenase | SAMN04488094_12911 | Not Available | Positive | 4844728 - 4845825 | 38395.7 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN04488094_12912 | Not Available | Positive | 4845822 - 4846526 | 26126.9 |
| nodulation protein s (nods) | SAMN04488094_12913 | Not Available | Positive | 4846526 - 4847089 | 20594.1 |
| glycosyl transferase family 2 | SAMN04488094_12914 | Not Available | Positive | 4847086 - 4848192 | 38700.5 |
| ferritin-like metal-binding protein ycie | SAMN04488094_12915 | Not Available | Positive | 4848194 - 4848682 | 17663.8 |
| transposase, is5 family | SAMN04488094_12916 | Not Available | Positive | 4849414 - 4849761 | 13125.8 |
| transposase | SAMN04488094_12917 | Not Available | Positive | 4849782 - 4850171 | 14822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
