Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage putative head morphogenesis protein, spp1 gp7 family | SAMN04488094_12817 | Not Available | Positive | 4832784 - 4833569 | 29293.8 |
| hypothetical protein | SAMN04488094_12818 | Not Available | Positive | 4833566 - 4834120 | 20860.7 |
| transposase dde domain-containing protein | SAMN04488094_12819 | Not Available | Positive | 4834253 - 4834514 | 9891.22 |
| hypothetical protein | SAMN04488094_1291 | Not Available | Negative | 4834555 - 4834731 | 6224.71 |
| catalase | SAMN04488094_1292 | Not Available | Positive | 4834964 - 4837072 | 77768.5 |
| hypothetical protein | SAMN04488094_1293 | Not Available | Negative | 4837093 - 4837869 | 27996.1 |
| sodium/proton antiporter, cpa1 family | SAMN04488094_1294 | Not Available | Negative | 4837940 - 4839181 | 43904.4 |
| protein of unknown function | SAMN04488094_1295 | Not Available | Negative | 4839183 - 4839698 | 18580.7 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN04488094_1296 | Not Available | Positive | 4839866 - 4840309 | 15326.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488094_1297 | Not Available | Positive | 4840320 - 4841057 | 27952.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
