Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ala-trna(pro) hydrolase | SAMN04488094_101264 | Not Available | Negative | 286047 - 286766 | 25747.1 |
| small-conductance mechanosensitive channel | SAMN04488094_101265 | Not Available | Negative | 286763 - 289276 | 90565.4 |
| cysteine synthase a | SAMN04488094_101266 | Not Available | Negative | 289279 - 290313 | 36188.1 |
| nudix-type nucleoside diphosphatase, yffh/adpp family | SAMN04488094_101267 | Not Available | Negative | 290365 - 291483 | 40810.4 |
| hypothetical protein | SAMN04488094_101268 | Not Available | Negative | 291506 - 291949 | 16046.1 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN04488094_101269 | Not Available | Negative | 291980 - 293191 | 46402.9 |
| deoxyribodipyrimidine photo-lyase | SAMN04488094_101270 | Not Available | Negative | 293414 - 294838 | 52969.3 |
| selenocysteine lyase/cysteine desulfurase | SAMN04488094_101271 | Not Available | Negative | 294917 - 296143 | 44123.3 |
| betaine/carnitine transporter, bcct family | SAMN04488094_101272 | Not Available | Negative | 296240 - 297874 | 58430.8 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488094_101273 | Not Available | Negative | 297919 - 298335 | 15006.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
