Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted phage recombinase, reca/rada family | SAMN04488094_1287 | Not Available | Negative | 4819497 - 4819841 | 11254.4 |
| hypothetical protein | SAMN04488094_1288 | Not Available | Negative | 4819843 - 4820052 | 7531.02 |
| mu-like prophage major head subunit gpt | SAMN04488094_1289 | Not Available | Negative | 4820055 - 4821929 | 67554.9 |
| phage portal protein, lambda family | SAMN04488094_12810 | Not Available | Negative | 4821922 - 4823244 | 47495.9 |
| type i restriction-modification system, dna methylase subunit | SAMN04488094_12811 | Not Available | Negative | 4823403 - 4826072 | 98712.3 |
| phage terminase, large subunit gpa | SAMN04488094_12812 | Not Available | Negative | 4826163 - 4827974 | 67438.6 |
| hypothetical protein | SAMN04488094_12813 | Not Available | Negative | 4827964 - 4828473 | 18390.1 |
| putative dna primase/helicase | SAMN04488094_12814 | Not Available | Negative | 4828833 - 4830752 | 70305.1 |
| hypothetical protein | SAMN04488094_12815 | Not Available | Negative | 4830764 - 4831414 | 23357.4 |
| site-specific recombinase xerc | SAMN04488094_12816 | Not Available | Positive | 4831602 - 4832705 | 41910.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
