Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_12720 | Not Available | Negative | 4810828 - 4810947 | 4489.43 |
| prc-barrel domain-containing protein | SAMN04488094_12721 | Not Available | Negative | 4810965 - 4811774 | 28213.7 |
| protein of unknown function | SAMN04488094_12722 | Not Available | Negative | 4811947 - 4812120 | 5809.7 |
| transposase, is4 family | SAMN04488094_12723 | Not Available | Negative | 4812197 - 4812517 | 12607.5 |
| transposase is66 family protein | SAMN04488094_1281 | Not Available | Positive | 4812518 - 4812794 | 9990.83 |
| aaa domain-containing protein | SAMN04488094_1282 | Not Available | Positive | 4812879 - 4813895 | 38654.6 |
| type i restriction enzyme m protein | SAMN04488094_1283 | Not Available | Positive | 4813892 - 4815523 | 61344.7 |
| site-specific recombinase xerd | SAMN04488094_1284 | Not Available | Negative | 4815562 - 4816803 | 47339.3 |
| hypothetical protein | SAMN04488094_1285 | Not Available | Positive | 4817656 - 4818720 | 40356.7 |
| hypothetical protein | SAMN04488094_1286 | Not Available | Positive | 4818729 - 4819493 | 28514.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
