Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488094_12710 | Not Available | Negative | 4797737 - 4800889 | 111432.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488094_12711 | Not Available | Negative | 4800893 - 4802038 | 41377.5 |
| dihydrolipoamide dehydrogenase | SAMN04488094_12712 | Not Available | Negative | 4802316 - 4803710 | 48795.8 |
| hypothetical protein | SAMN04488094_12713 | Not Available | Positive | 4804061 - 4804747 | 25515.1 |
| hypothetical protein | SAMN04488094_12714 | Not Available | Negative | 4804764 - 4804988 | 7824.68 |
| hypothetical protein | SAMN04488094_12715 | Not Available | Negative | 4805153 - 4806253 | 38595.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488094_12716 | Not Available | Negative | 4806404 - 4806910 | 19007.7 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN04488094_12717 | Not Available | Negative | 4807519 - 4809255 | 62179.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488094_12718 | Not Available | Negative | 4809252 - 4809824 | 21188.9 |
| sigma-70, region 4 | SAMN04488094_12719 | Not Available | Positive | 4810082 - 4810891 | 29003.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
