Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN04488094_12626 | Not Available | Negative | 4788803 - 4789309 | 18691.6 |
| bon domain-containing protein | SAMN04488094_1271 | Not Available | Negative | 4790053 - 4790478 | 14936.6 |
| protein of unknown function | SAMN04488094_1272 | Not Available | Positive | 4790731 - 4791072 | 12747.4 |
| predicted rna-binding protein, contains pua-like domain | SAMN04488094_1273 | Not Available | Negative | 4791247 - 4791666 | 15738.5 |
| hypothetical protein | SAMN04488094_1274 | Not Available | Negative | 4791666 - 4791938 | 9708.78 |
| o-sialoglycoprotein endopeptidase | SAMN04488094_1275 | Not Available | Negative | 4792002 - 4793180 | 40595.3 |
| uroporphyrinogen-iii synthase | SAMN04488094_1276 | Not Available | Positive | 4793184 - 4793900 | 24979.8 |
| hypothetical protein | SAMN04488094_1277 | Not Available | Positive | 4793977 - 4795743 | 62767.2 |
| hemy protein | SAMN04488094_1278 | Not Available | Positive | 4795754 - 4797265 | 54723.4 |
| Trna-thr | Not Available | Not Available | Positive | 4797466 - 4797541 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
