Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| butyryl-coa dehydrogenase | SAMN04488094_1266 | Not Available | Positive | 4768839 - 4770626 | 64106.9 |
| hypothetical protein | SAMN04488094_1267 | Not Available | Positive | 4770719 - 4771111 | 13883.8 |
| transposase | SAMN04488094_1268 | Not Available | Negative | 4771015 - 4772190 | 43436.1 |
| hypothetical protein | SAMN04488094_1269 | Not Available | Negative | 4772440 - 4772679 | 8974.11 |
| transposase, is5 family | SAMN04488094_12610 | Not Available | Negative | 4772717 - 4774078 | 51262.4 |
| smp-30/gluconolaconase/lre-like region-containing protein | SAMN04488094_12611 | Not Available | Negative | 4774193 - 4774870 | 24494.5 |
| short-chain dehydrogenase | SAMN04488094_12612 | Not Available | Negative | 4774894 - 4775664 | 26894.9 |
| broad specificity phosphatase phoe | SAMN04488094_12613 | Not Available | Negative | 4775648 - 4776292 | 22782.1 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN04488094_12614 | Not Available | Negative | 4776292 - 4777356 | 40741.9 |
| hypothetical protein | SAMN04488094_12615 | Not Available | Negative | 4777353 - 4778585 | 45591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
