Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yfca | SAMN04488094_12517 | Not Available | Positive | 4744226 - 4745053 | 28048.6 |
| pyruvate dehydrogenase (quinone) | SAMN04488094_12518 | Not Available | Positive | 4745280 - 4747046 | 63241.1 |
| putative tricarboxylic transport membrane protein | SAMN04488094_12519 | Not Available | Negative | 4747166 - 4748704 | 53559.1 |
| putative tricarboxylic transport membrane protein | SAMN04488094_12520 | Not Available | Negative | 4748715 - 4749146 | 14953.7 |
| putative tricarboxylic transport membrane protein | SAMN04488094_12521 | Not Available | Negative | 4749244 - 4750233 | 34293.3 |
| two-component system, ompr family, response regulator tctd | SAMN04488094_12522 | Not Available | Positive | 4750419 - 4751090 | 24865.1 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN04488094_12523 | Not Available | Positive | 4751083 - 4752483 | 50361.3 |
| iron(iii) transport system substrate-binding protein | SAMN04488094_12524 | Not Available | Positive | 4752480 - 4753514 | 36953.2 |
| hypothetical protein | SAMN04488094_12525 | Not Available | Positive | 4753698 - 4753931 | 8196.61 |
| sulfide dehydrogenase (flavoprotein) subunit sudb | SAMN04488094_12526 | Not Available | Positive | 4754125 - 4755087 | 34326.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
