Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin maze | SAMN04488094_12438 | Not Available | Positive | 4723499 - 4723726 | 8536.31 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN04488094_12439 | Not Available | Positive | 4723716 - 4724111 | 14213.0 |
| resolvase, n terminal domain | SAMN04488094_12440 | Not Available | Negative | 4724190 - 4725074 | 32842.7 |
| hth dna binding domain-containing protein | SAMN04488094_12441 | Not Available | Positive | 4725301 - 4726368 | 38804.0 |
| adenosylhomocysteinase | SAMN04488094_1251 | Not Available | Positive | 4726483 - 4726929 | 16889.4 |
| methyltransferase domain-containing protein | SAMN04488094_1252 | Not Available | Positive | 4726990 - 4727919 | 35272.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488094_1253 | Not Available | Positive | 4727983 - 4729848 | 69726.4 |
| glycosyl transferase family 2 | SAMN04488094_1254 | Not Available | Negative | 4729907 - 4730860 | 35197.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488094_1255 | Not Available | Negative | 4730857 - 4731840 | 35745.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488094_1256 | Not Available | Negative | 4731932 - 4733251 | 47356.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
