Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN04488094_101254 | Not Available | Negative | 273991 - 276432 | 87419.3 |
| gaf domain-containing protein | SAMN04488094_101255 | Not Available | Negative | 276447 - 277391 | 33533.0 |
| nitrate/nitrite transport system atp-binding protein | SAMN04488094_101256 | Not Available | Negative | 277415 - 279112 | 61963.8 |
| nitrate/nitrite transport system permease protein | SAMN04488094_101257 | Not Available | Negative | 279118 - 280203 | 39615.7 |
| nitrate/nitrite transport system substrate-binding protein | SAMN04488094_101258 | Not Available | Negative | 280340 - 281707 | 50104.0 |
| nitt/taut family transport system atp-binding protein | SAMN04488094_101259 | Not Available | Negative | 281983 - 283161 | 41907.5 |
| response regulator receiver and antar domain protein | SAMN04488094_101260 | Not Available | Negative | 283158 - 283742 | 21306.0 |
| amidase | SAMN04488094_101261 | Not Available | Negative | 284383 - 284820 | 15978.3 |
| hypothetical protein | SAMN04488094_101262 | Not Available | Positive | 285465 - 285617 | 5835.14 |
| Trna-ser | Not Available | Not Available | Positive | 285888 - 285977 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
