Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488094_1248 | Not Available | Negative | 4693467 - 4694195 | 26245.9 |
| hypothetical protein | SAMN04488094_1249 | Not Available | Negative | 4694320 - 4694625 | 10944.7 |
| c-terminal domain on strawberry notch homologue | SAMN04488094_12410 | Not Available | Negative | 4694642 - 4695898 | 45855.2 |
| methyltransferase domain-containing protein | SAMN04488094_12411 | Not Available | Negative | 4695935 - 4698916 | 107331.0 |
| hypothetical protein | SAMN04488094_12412 | Not Available | Negative | 4699162 - 4699326 | 6171.32 |
| toxin yhav | SAMN04488094_12413 | Not Available | Negative | 4699421 - 4699939 | 19347.0 |
| antitoxin prlf | SAMN04488094_12414 | Not Available | Negative | 4699936 - 4700262 | 11911.0 |
| hypothetical protein | SAMN04488094_12415 | Not Available | Negative | 4700388 - 4701041 | 24020.2 |
| hypothetical protein | SAMN04488094_12416 | Not Available | Negative | 4701041 - 4701634 | 21689.9 |
| chromosome partitioning protein, parb family | SAMN04488094_12417 | Not Available | Negative | 4701711 - 4703693 | 71442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
