Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_12343 | Not Available | Negative | 4687198 - 4687827 | 22439.1 |
| protein translocase subunit sece/sec61 gamma | SAMN04488094_12344 | Not Available | Positive | 4687890 - 4688237 | 12533.5 |
| serralysin | SAMN04488094_12345 | Not Available | Negative | 4688285 - 4688569 | 10035.8 |
| transposase is66 family protein | SAMN04488094_1241 | Not Available | Positive | 4688843 - 4689094 | 9067.8 |
| tir domain-containing protein | SAMN04488094_1242 | Not Available | Negative | 4689214 - 4690179 | 36263.7 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN04488094_1243 | Not Available | Negative | 4690199 - 4691089 | 33111.3 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04488094_1244 | Not Available | Negative | 4691086 - 4691391 | 11632.0 |
| hypothetical protein | SAMN04488094_1245 | Not Available | Negative | 4691437 - 4691604 | 6517.91 |
| membrane associated serine protease, rhomboid family | SAMN04488094_1246 | Not Available | Negative | 4692044 - 4692697 | 22637.3 |
| hypothetical protein | SAMN04488094_1247 | Not Available | Negative | 4692774 - 4693310 | 20069.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
