Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN04488094_12333 | Not Available | Positive | 4674035 - 4676569 | 88201.0 |
| isopenicillin n synthase | SAMN04488094_12334 | Not Available | Negative | 4676573 - 4677469 | 32573.4 |
| trna 2-selenouridine synthase | SAMN04488094_12335 | Not Available | Positive | 4677809 - 4678882 | 38933.5 |
| selenophosphate synthase | SAMN04488094_12336 | Not Available | Negative | 4678866 - 4681043 | 75916.1 |
| Trna-met | Not Available | Not Available | Positive | 4681224 - 4681300 | Not Available |
| small-conductance mechanosensitive channel | SAMN04488094_12338 | Not Available | Negative | 4681927 - 4683258 | 47472.2 |
| hypothetical protein | SAMN04488094_12339 | Not Available | Positive | 4683583 - 4684002 | 15267.0 |
| predicted transglutaminase-like cysteine proteinase | SAMN04488094_12340 | Not Available | Positive | 4684156 - 4684740 | 21675.0 |
| ppic-type ppiase domain-containing protein | SAMN04488094_12341 | Not Available | Positive | 4685032 - 4685874 | 30631.6 |
| hydrogenase/urease accessory protein hupe | SAMN04488094_12342 | Not Available | Positive | 4685871 - 4686869 | 35334.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
