Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosyl-3-phosphoglycerate synthase | SAMN04488094_12323 | Not Available | Positive | 4663382 - 4664602 | 45951.9 |
| gtp-binding protein | SAMN04488094_12324 | Not Available | Negative | 4664696 - 4665349 | 23479.5 |
| virginiamycin a acetyltransferase | SAMN04488094_12325 | Not Available | Negative | 4665346 - 4665984 | 23359.6 |
| hypothetical protein | SAMN04488094_12326 | Not Available | Negative | 4665984 - 4666742 | 27703.1 |
| protein translocase subunit yidc | SAMN04488094_12327 | Not Available | Negative | 4666739 - 4668544 | 66998.6 |
| diguanylate cyclase/phosphodiesterase | SAMN04488094_12328 | Not Available | Negative | 4668699 - 4670237 | 56717.9 |
| trna 2-thiocytidine biosynthesis protein ttca | SAMN04488094_12329 | Not Available | Negative | 4670331 - 4671176 | 32009.6 |
| fad/fmn-containing dehydrogenase | SAMN04488094_12330 | Not Available | Negative | 4671222 - 4672628 | 49267.1 |
| acyl-coa thioesterase-1 | SAMN04488094_12331 | Not Available | Negative | 4672625 - 4673278 | 22443.4 |
| putative abc transport system atp-binding protein | SAMN04488094_12332 | Not Available | Positive | 4673349 - 4674038 | 24131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
