Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin c transport system atp-binding protein | SAMN04488094_12313 | Not Available | Negative | 4651186 - 4652802 | 59283.1 |
| microcin c transport system permease protein | SAMN04488094_12314 | Not Available | Negative | 4652941 - 4654101 | 43309.7 |
| microcin c transport system permease protein | SAMN04488094_12315 | Not Available | Negative | 4654103 - 4655185 | 39683.7 |
| microcin c transport system substrate-binding protein | SAMN04488094_12316 | Not Available | Negative | 4655187 - 4657073 | 70443.9 |
| cytochrome c | SAMN04488094_12317 | Not Available | Negative | 4657252 - 4657773 | 18088.2 |
| prephenate dehydratase | SAMN04488094_12318 | Not Available | Positive | 4657898 - 4658737 | 30937.8 |
| hypothetical protein | SAMN04488094_12319 | Not Available | Negative | 4658773 - 4659234 | 16392.1 |
| nad+ diphosphatase | SAMN04488094_12320 | Not Available | Negative | 4659290 - 4660258 | 35118.8 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase | SAMN04488094_12321 | Not Available | Positive | 4660469 - 4662412 | 70427.0 |
| mannosyl-3-phosphoglycerate phosphatase | SAMN04488094_12322 | Not Available | Positive | 4662488 - 4663366 | 31600.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
