Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu2+-exporting atpase | SAMN04488094_1233 | Not Available | Negative | 4639534 - 4641615 | 72313.0 |
| nitrogen fixation protein fixh | SAMN04488094_1234 | Not Available | Negative | 4641745 - 4642191 | 15845.8 |
| cytochrome c oxidase accessory protein fixg | SAMN04488094_1235 | Not Available | Negative | 4642194 - 4643759 | 58790.0 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN04488094_1236 | Not Available | Negative | 4644271 - 4645167 | 32470.6 |
| cytochrome c oxidase cbb3-type subunit 4 | SAMN04488094_1237 | Not Available | Negative | 4645164 - 4645382 | 8283.74 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN04488094_1238 | Not Available | Negative | 4645396 - 4646223 | 31274.8 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN04488094_1239 | Not Available | Negative | 4646237 - 4647844 | 59937.6 |
| universal stress protein family protein | SAMN04488094_12310 | Not Available | Positive | 4648045 - 4648881 | 29509.3 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04488094_12311 | Not Available | Negative | 4649006 - 4649746 | 27573.4 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04488094_12312 | Not Available | Positive | 4650093 - 4651172 | 39288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
