Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, rpir family | SAMN04488094_101244 | Not Available | Positive | 262096 - 262995 | 32693.0 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN04488094_101245 | Not Available | Positive | 263398 - 263901 | 17916.0 |
| xanthine dehydrogenase yags fad-binding subunit | SAMN04488094_101246 | Not Available | Positive | 263898 - 264881 | 34743.7 |
| xanthine dehydrogenase yagr molybdenum-binding subunit | SAMN04488094_101247 | Not Available | Positive | 264878 - 267067 | 77489.6 |
| xanthine dehydrogenase accessory factor | SAMN04488094_101248 | Not Available | Positive | 267064 - 267897 | 30283.4 |
| molybdenum cofactor cytidylyltransferase | SAMN04488094_101249 | Not Available | Positive | 267887 - 268438 | 19296.1 |
| uroporphyrin-iii c-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN04488094_101250 | Not Available | Negative | 268670 - 270061 | 48795.9 |
| anthranilate phosphoribosyltransferase | SAMN04488094_101251 | Not Available | Negative | 270073 - 271044 | 34184.0 |
| assimilatory nitrate reductase (nadh) alpha subunit apoprotein | SAMN04488094_101252 | Not Available | Negative | 271041 - 273665 | 92666.9 |
| nitrite reductase (nadh) small subunit | SAMN04488094_101253 | Not Available | Negative | 273662 - 273994 | 11836.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
