Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, cupin superfamily | SAMN04488094_12217 | Not Available | Positive | 4602690 - 4603625 | 33207.9 |
| 3-hydroxyacyl-coa dehydrogenase / enoyl-coa hydratase / 3-hydroxybutyryl-coa epimerase | SAMN04488094_12218 | Not Available | Positive | 4603622 - 4605817 | 78056.7 |
| hint domain-containing protein | SAMN04488094_12219 | Not Available | Negative | 4605926 - 4606597 | 23605.6 |
| hypothetical protein | SAMN04488094_12220 | Not Available | Positive | 4606927 - 4607943 | 35801.1 |
| sporulation related domain-containing protein | SAMN04488094_12221 | Not Available | Negative | 4608051 - 4609001 | 32732.8 |
| uracil phosphoribosyltransferase | SAMN04488094_12222 | Not Available | Negative | 4609096 - 4609728 | 23163.5 |
| adenosine deaminase | SAMN04488094_12223 | Not Available | Negative | 4609721 - 4610707 | 35458.0 |
| phosphopentomutase | SAMN04488094_12224 | Not Available | Negative | 4610707 - 4611918 | 43002.0 |
| thymidine phosphorylase | SAMN04488094_12225 | Not Available | Negative | 4611915 - 4613225 | 44530.4 |
| cytidine deaminase | SAMN04488094_12226 | Not Available | Negative | 4613227 - 4613628 | 13677.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
