Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_12164 | Not Available | Positive | 4586237 - 4586932 | 25899.8 |
| hypothetical protein | SAMN04488094_12165 | Not Available | Negative | 4587036 - 4587260 | 8415.83 |
| helix-turn-helix domain-containing protein | SAMN04488094_12166 | Not Available | Negative | 4587427 - 4587684 | 9146.21 |
| hypothetical protein | SAMN04488094_12167 | Not Available | Negative | 4587809 - 4587967 | 6228.09 |
| aspartate aminotransferase | SAMN04488094_1221 | Not Available | Positive | 4588197 - 4589330 | 40257.3 |
| l-glyceraldehyde 3-phosphate reductase | SAMN04488094_1222 | Not Available | Positive | 4589439 - 4590470 | 37765.5 |
| putative sos response-associated peptidase yedk | SAMN04488094_1223 | Not Available | Negative | 4590472 - 4591137 | 24343.2 |
| 5'-nucleotidase | SAMN04488094_1224 | Not Available | Negative | 4591212 - 4592783 | 55790.1 |
| uncharacterized conserved protein, duf952 family | SAMN04488094_1225 | Not Available | Positive | 4592932 - 4593270 | 12193.6 |
| dihydroorotate oxidase a | SAMN04488094_1226 | Not Available | Positive | 4593267 - 4594313 | 36198.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
