Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein sco1/2 | SAMN04488094_12154 | Not Available | Negative | 4579898 - 4580524 | 23008.2 |
| hypothetical protein | SAMN04488094_12155 | Not Available | Negative | 4580524 - 4580994 | 16102.5 |
| thioredoxin | SAMN04488094_12156 | Not Available | Negative | 4581017 - 4581676 | 23471.2 |
| disulfide bond formation protein dsbb | SAMN04488094_12157 | Not Available | Negative | 4581673 - 4582095 | 15012.9 |
| protein sco1/2 | SAMN04488094_12158 | Not Available | Negative | 4582101 - 4582670 | 20856.6 |
| cu(i)-responsive transcriptional regulator | SAMN04488094_12159 | Not Available | Positive | 4582881 - 4583309 | 16019.2 |
| cation efflux family protein | SAMN04488094_12160 | Not Available | Positive | 4583392 - 4584012 | 21815.3 |
| transglutaminase-like superfamily protein | SAMN04488094_12161 | Not Available | Positive | 4584082 - 4584645 | 21311.6 |
| cobalt-zinc-cadmium efflux system protein | SAMN04488094_12162 | Not Available | Positive | 4584635 - 4585600 | 35211.5 |
| spoiiaa-like | SAMN04488094_12163 | Not Available | Positive | 4585572 - 4585883 | 11497.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
