Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN04488094_12134 | Not Available | Positive | 4561149 - 4561814 | 24340.7 |
| hypothetical protein | SAMN04488094_12135 | Not Available | Negative | 4561891 - 4562520 | 22300.5 |
| ef hand | SAMN04488094_12136 | Not Available | Positive | 4562846 - 4563454 | 21149.7 |
| uncharacterized conserved protein, duf302 family | SAMN04488094_12137 | Not Available | Positive | 4563595 - 4563981 | 13989.9 |
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | SAMN04488094_12138 | Not Available | Positive | 4564087 - 4565007 | 33210.1 |
| cu+-exporting atpase | SAMN04488094_12139 | Not Available | Positive | 4565332 - 4567431 | 74165.3 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488094_12140 | Not Available | Positive | 4567480 - 4568811 | 46320.5 |
| hypothetical protein | SAMN04488094_12141 | Not Available | Negative | 4568819 - 4569463 | 22956.7 |
| cytochrome c-type biogenesis protein | SAMN04488094_12142 | Not Available | Positive | 4569803 - 4570402 | 20955.5 |
| l,d-transpeptidase catalytic domain | SAMN04488094_12143 | Not Available | Positive | 4570596 - 4571261 | 24546.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
