Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c, mono-and diheme variants | SAMN04488094_12124 | Not Available | Positive | 4552164 - 4552646 | 17489.1 |
| protein-disulfide isomerase | SAMN04488094_12125 | Not Available | Positive | 4552648 - 4553379 | 27104.3 |
| copper chaperone | SAMN04488094_12126 | Not Available | Negative | 4553422 - 4553622 | 6828.99 |
| cu+-exporting atpase | SAMN04488094_12127 | Not Available | Positive | 4553775 - 4556285 | 87055.9 |
| cu(i)-responsive transcriptional regulator | SAMN04488094_12128 | Not Available | Positive | 4556298 - 4556696 | 15025.0 |
| glutaredoxin | SAMN04488094_12129 | Not Available | Negative | 4556718 - 4557482 | 28579.7 |
| protein of unknown function | SAMN04488094_12130 | Not Available | Negative | 4557495 - 4558331 | 30278.4 |
| l,d-transpeptidase catalytic domain | SAMN04488094_12131 | Not Available | Positive | 4558511 - 4559092 | 22046.5 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN04488094_12132 | Not Available | Positive | 4559218 - 4560480 | 45416.8 |
| disulfide bond formation protein dsbb | SAMN04488094_12133 | Not Available | Positive | 4560648 - 4561106 | 16161.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
