Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbe | SAMN04488094_12114 | Not Available | Positive | 4542732 - 4543298 | 20336.3 |
| cytochrome c-type biogenesis protein ccmh | SAMN04488094_12115 | Not Available | Positive | 4543295 - 4543768 | 17401.9 |
| cytochrome c-type biogenesis protein ccmh | SAMN04488094_12116 | Not Available | Positive | 4543765 - 4544916 | 41556.7 |
| suppressor for copper-sensitivity b | SAMN04488094_12117 | Not Available | Negative | 4544945 - 4547074 | 75522.0 |
| protein of unknown function | SAMN04488094_12118 | Not Available | Negative | 4547358 - 4547660 | 10949.7 |
| l,d-transpeptidase catalytic domain | SAMN04488094_12119 | Not Available | Positive | 4547817 - 4548377 | 21164.2 |
| cytochrome c553 | SAMN04488094_12120 | Not Available | Positive | 4548406 - 4548864 | 16115.2 |
| cytochrome c556 | SAMN04488094_12121 | Not Available | Positive | 4549237 - 4549809 | 19688.5 |
| cytochrome c, mono-and diheme variants | SAMN04488094_12122 | Not Available | Positive | 4549812 - 4550729 | 32263.6 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488094_12123 | Not Available | Positive | 4550773 - 4552167 | 51232.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
