Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488094_1214 | Not Available | Negative | 4533777 - 4534769 | 36742.9 |
| cobalt-zinc-cadmium efflux system protein | SAMN04488094_1215 | Not Available | Negative | 4534776 - 4535762 | 35275.9 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN04488094_1216 | Not Available | Negative | 4535764 - 4536426 | 23104.8 |
| hypothetical protein | SAMN04488094_1217 | Not Available | Negative | 4536430 - 4536879 | 16496.3 |
| hypothetical protein | SAMN04488094_1218 | Not Available | Negative | 4537041 - 4537526 | 17782.1 |
| rhodanese-related sulfurtransferase | SAMN04488094_1219 | Not Available | Negative | 4537567 - 4538193 | 22420.2 |
| two-component system, ompr family, response regulator | SAMN04488094_12110 | Not Available | Positive | 4538229 - 4538951 | 26685.4 |
| signal transduction histidine kinase | SAMN04488094_12111 | Not Available | Positive | 4538951 - 4540417 | 53554.3 |
| putative membrane protein | SAMN04488094_12112 | Not Available | Positive | 4540443 - 4540658 | 8125.83 |
| cytochrome c-type biogenesis protein ccmf | SAMN04488094_12113 | Not Available | Positive | 4540723 - 4542723 | 72143.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
