Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted phage recombinase, reca/rada family | SAMN04488094_12049 | Not Available | Negative | 4525467 - 4525802 | 11246.4 |
| prohead serine protease | SAMN04488094_12050 | Not Available | Negative | 4525880 - 4527943 | 74993.3 |
| phage portal protein, lambda family | SAMN04488094_12051 | Not Available | Negative | 4527957 - 4529507 | 55630.7 |
| gpw protein | SAMN04488094_12052 | Not Available | Negative | 4529507 - 4529713 | 7324.53 |
| phage terminase, large subunit gpa | SAMN04488094_12053 | Not Available | Negative | 4529713 - 4531707 | 73555.5 |
| hypothetical protein | SAMN04488094_12054 | Not Available | Negative | 4531658 - 4532215 | 19965.1 |
| hypothetical protein | SAMN04488094_12055 | Not Available | Positive | 4532328 - 4532490 | 6204.45 |
| hypothetical protein | SAMN04488094_1211 | Not Available | Negative | 4532491 - 4532643 | 5572.64 |
| transposase, is4 family | SAMN04488094_1212 | Not Available | Negative | 4532735 - 4533124 | 15076.5 |
| transposase, is5 family | SAMN04488094_1213 | Not Available | Negative | 4533145 - 4533492 | 13147.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
