Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase family protein | SAMN04488094_101234 | Not Available | Positive | 252619 - 253035 | 15148.1 |
| arac family transcriptional regulator, mar-sox-rob regulon activator | SAMN04488094_101235 | Not Available | Negative | 253130 - 253915 | 28463.7 |
| hypothetical protein | SAMN04488094_101236 | Not Available | Positive | 254028 - 254408 | 13333.0 |
| predicted amidohydrolase | SAMN04488094_101237 | Not Available | Negative | 254602 - 255579 | 36572.4 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN04488094_101238 | Not Available | Negative | 255576 - 256826 | 43637.2 |
| diaminopropionate ammonia-lyase | SAMN04488094_101239 | Not Available | Negative | 256823 - 258073 | 43539.1 |
| spermidine/putrescine transport system permease protein | SAMN04488094_101240 | Not Available | Negative | 258088 - 258861 | 27982.2 |
| spermidine/putrescine transport system permease protein | SAMN04488094_101241 | Not Available | Negative | 258861 - 259724 | 30655.2 |
| spermidine/putrescine transport system atp-binding protein | SAMN04488094_101242 | Not Available | Negative | 259724 - 260827 | 40072.1 |
| spermidine/putrescine transport system substrate-binding protein | SAMN04488094_101243 | Not Available | Negative | 260829 - 261896 | 39715.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
