Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonyl-coa carboxylase/reductase | SAMN04488094_11939 | Not Available | Positive | 4457345 - 4458628 | 47317.6 |
| regulatory protein, luxr family | SAMN04488094_11940 | Not Available | Positive | 4459153 - 4459866 | 26643.6 |
| n-acyl-l-homoserine lactone synthetase | SAMN04488094_11941 | Not Available | Positive | 4459983 - 4460627 | 24614.6 |
| exodeoxyribonuclease-5 | SAMN04488094_11942 | Not Available | Positive | 4460681 - 4462204 | 55660.6 |
| hint domain-containing protein | SAMN04488094_11943 | Not Available | Negative | 4462220 - 4462786 | 20350.6 |
| hypothetical protein | SAMN04488094_11944 | Not Available | Negative | 4463307 - 4463456 | 5819.95 |
| conserved hypothetical protein | SAMN04488094_11945 | Not Available | Negative | 4463569 - 4464321 | 26785.5 |
| sam-dependent methyltransferase, mida family | SAMN04488094_11946 | Not Available | Negative | 4464318 - 4465391 | 38155.7 |
| prolipoprotein diacylglyceryl transferase | SAMN04488094_11947 | Not Available | Negative | 4465388 - 4466314 | 33949.8 |
| hypothetical protein | SAMN04488094_11948 | Not Available | Positive | 4466412 - 4466678 | 9795.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
