Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN04488094_11929 | Not Available | Positive | 4445328 - 4447622 | 83996.2 |
| methyltransferase domain-containing protein | SAMN04488094_11930 | Not Available | Positive | 4447619 - 4448824 | 43968.9 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488094_11931 | Not Available | Positive | 4448854 - 4450353 | 52434.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488094_11932 | Not Available | Positive | 4450471 - 4451514 | 39179.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488094_11933 | Not Available | Positive | 4451511 - 4452722 | 44406.9 |
| Trna-gly | Not Available | Not Available | Positive | 4452828 - 4452901 | Not Available |
| hypothetical protein | SAMN04488094_11935 | Not Available | Negative | 4453045 - 4453458 | 14821.4 |
| purine-nucleoside phosphorylase | SAMN04488094_11936 | Not Available | Negative | 4453872 - 4454576 | 25008.7 |
| dna-binding protein h-ns | SAMN04488094_11937 | Not Available | Negative | 4454644 - 4454982 | 12166.2 |
| (r)-ethylmalonyl-coa mutase | SAMN04488094_11938 | Not Available | Negative | 4455082 - 4457049 | 72022.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
