Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | SAMN04488094_1199 | Not Available | Positive | 4417513 - 4418289 | 28244.3 |
| small subunit ribosomal protein s20 | SAMN04488094_11910 | Not Available | Positive | 4418377 - 4418643 | 9849.97 |
| chromosomal replication initiator protein | SAMN04488094_11911 | Not Available | Positive | 4419204 - 4420601 | 52773.6 |
| dna polymerase iii, beta subunit | SAMN04488094_11912 | Not Available | Positive | 4420712 - 4421830 | 40478.3 |
| dna replication and repair protein recf | SAMN04488094_11913 | Not Available | Positive | 4421908 - 4423020 | 39697.3 |
| dna gyrase subunit b | SAMN04488094_11914 | Not Available | Positive | 4423148 - 4425565 | 89447.3 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN04488094_11915 | Not Available | Negative | 4425663 - 4426799 | 40797.5 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN04488094_11916 | Not Available | Negative | 4426799 - 4427794 | 35249.6 |
| serine/threonine-protein kinase rsbt | SAMN04488094_11917 | Not Available | Negative | 4427794 - 4428120 | 11501.7 |
| rsbt antagonist protein rsbs | SAMN04488094_11918 | Not Available | Negative | 4428200 - 4428553 | 12618.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
