Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter solute receptor, dctp family | SAMN04488094_11875 | Not Available | Negative | 4409079 - 4410062 | 36098.0 |
| two-component system, citb family, response regulator dcur | SAMN04488094_11876 | Not Available | Negative | 4410220 - 4410873 | 23878.7 |
| transposase, is5 family | SAMN04488094_1191 | Not Available | Negative | 4410874 - 4411137 | 10361.5 |
| hypothetical protein | SAMN04488094_1192 | Not Available | Negative | 4411259 - 4411600 | 12806.3 |
| rod binding protein | SAMN04488094_1193 | Not Available | Negative | 4411590 - 4411886 | 10725.9 |
| hook-length control protein flik | SAMN04488094_1194 | Not Available | Positive | 4412003 - 4413517 | 53873.7 |
| flagellar basal-body rod modification protein flgd | SAMN04488094_1195 | Not Available | Positive | 4413525 - 4414199 | 23835.6 |
| 2-octaprenylphenol hydroxylase | SAMN04488094_1196 | Not Available | Negative | 4414212 - 4415678 | 54333.5 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN04488094_1197 | Not Available | Negative | 4415749 - 4416501 | 28168.4 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN04488094_1198 | Not Available | Positive | 4416597 - 4417448 | 30753.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
