Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yfca | SAMN04488094_11865 | Not Available | Negative | 4400406 - 4401218 | 27941.3 |
| hypothetical protein | SAMN04488094_11866 | Not Available | Negative | 4401222 - 4401371 | 5317.23 |
| 3-dehydroquinate dehydratase | SAMN04488094_11867 | Not Available | Positive | 4401669 - 4402109 | 15976.1 |
| transcriptional regulator, tetr family | SAMN04488094_11868 | Not Available | Negative | 4402122 - 4402790 | 25281.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN04488094_11869 | Not Available | Positive | 4402959 - 4403951 | 35207.3 |
| tripartite tricarboxylate transporter tctb family protein | SAMN04488094_11870 | Not Available | Positive | 4404020 - 4404535 | 18050.9 |
| putative tricarboxylic transport membrane protein | SAMN04488094_11871 | Not Available | Positive | 4404532 - 4406055 | 53768.5 |
| shikimate dehydrogenase | SAMN04488094_11872 | Not Available | Positive | 4406167 - 4407003 | 29390.1 |
| c4-dicarboxylate transporter, dctm subunit | SAMN04488094_11873 | Not Available | Negative | 4407176 - 4408450 | 44364.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488094_11874 | Not Available | Negative | 4408452 - 4408997 | 20043.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
