Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488094_101224 | Not Available | Positive | 240959 - 241960 | 35664.2 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN04488094_101225 | Not Available | Positive | 241957 - 243480 | 55262.4 |
| peptide/nickel transport system atp-binding protein | SAMN04488094_101226 | Not Available | Negative | 243564 - 244577 | 37351.4 |
| peptide/nickel transport system atp-binding protein | SAMN04488094_101227 | Not Available | Negative | 244574 - 245581 | 35904.7 |
| peptide/nickel transport system permease protein | SAMN04488094_101228 | Not Available | Negative | 245571 - 246545 | 35607.6 |
| peptide/nickel transport system permease protein | SAMN04488094_101229 | Not Available | Negative | 246545 - 247585 | 36533.5 |
| peptide/nickel transport system substrate-binding protein | SAMN04488094_101230 | Not Available | Negative | 247656 - 249590 | 69897.1 |
| luxr family transcriptional regulator | SAMN04488094_101231 | Not Available | Positive | 249703 - 250404 | 25523.6 |
| l-proline amide hydrolase | SAMN04488094_101232 | Not Available | Positive | 250511 - 251410 | 33113.2 |
| transcriptional regulator, arac family | SAMN04488094_101233 | Not Available | Negative | 251603 - 252484 | 32416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
