Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator lsrr, deor family | SAMN04488094_11855 | Not Available | Negative | 4387983 - 4388954 | 34766.3 |
| glycerol kinase | SAMN04488094_11856 | Not Available | Negative | 4389005 - 4390477 | 51707.2 |
| transketolase subunit b | SAMN04488094_11857 | Not Available | Negative | 4390508 - 4391467 | 33343.1 |
| transketolase subunit a | SAMN04488094_11858 | Not Available | Negative | 4391464 - 4392285 | 30005.8 |
| ribose transport system permease protein | SAMN04488094_11859 | Not Available | Positive | 4392474 - 4393454 | 33404.2 |
| ribose transport system substrate-binding protein | SAMN04488094_11860 | Not Available | Positive | 4393565 - 4394500 | 32609.8 |
| abc-type sugar transport system, atpase component | SAMN04488094_11861 | Not Available | Positive | 4394540 - 4397038 | 89888.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_11862 | Not Available | Positive | 4397040 - 4397828 | 27625.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488094_11863 | Not Available | Positive | 4398152 - 4399093 | 34252.7 |
| d-amino-acid dehydrogenase | SAMN04488094_11864 | Not Available | Negative | 4399145 - 4400380 | 44056.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
