Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein | SAMN04488094_11845 | Not Available | Negative | 4378186 - 4378785 | 20177.5 |
| hypothetical protein | SAMN04488094_11846 | Not Available | Positive | 4378986 - 4379384 | 14139.0 |
| hypothetical protein | SAMN04488094_11847 | Not Available | Negative | 4379457 - 4380167 | 25659.8 |
| cellulose biosynthesis protein bcsq | SAMN04488094_11848 | Not Available | Positive | 4380642 - 4381940 | 48874.9 |
| chromosome partitioning protein, parb family | SAMN04488094_11849 | Not Available | Positive | 4381937 - 4383037 | 40305.8 |
| hydroxypyruvate isomerase | SAMN04488094_11850 | Not Available | Negative | 4383466 - 4384221 | 27294.5 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN04488094_11851 | Not Available | Negative | 4384223 - 4384876 | 23441.4 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN04488094_11852 | Not Available | Negative | 4384873 - 4386150 | 44422.4 |
| dna-binding transcriptional regulator, fadr family | SAMN04488094_11853 | Not Available | Negative | 4386260 - 4386988 | 26441.6 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN04488094_11854 | Not Available | Negative | 4387186 - 4387968 | 27855.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
