Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_11835 | Not Available | Positive | 4370966 - 4371163 | 7765.29 |
| protein of unknown function | SAMN04488094_11836 | Not Available | Negative | 4371183 - 4372187 | 37635.8 |
| hypothetical protein | SAMN04488094_11837 | Not Available | Positive | 4372418 - 4372819 | 13968.3 |
| myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenase | SAMN04488094_11838 | Not Available | Negative | 4373104 - 4374096 | 34284.1 |
| transcriptional regulator, laci family | SAMN04488094_11839 | Not Available | Positive | 4374265 - 4375287 | 37209.2 |
| putative addiction module antidote | SAMN04488094_11840 | Not Available | Positive | 4375347 - 4375571 | 7935.65 |
| death on curing protein | SAMN04488094_11841 | Not Available | Positive | 4375568 - 4375954 | 13713.7 |
| glycosyl transferase family 8 | SAMN04488094_11842 | Not Available | Positive | 4376146 - 4377174 | 38966.5 |
| predicted ester cyclase | SAMN04488094_11843 | Not Available | Negative | 4377187 - 4377573 | 14356.3 |
| hupe / urej protein | SAMN04488094_11844 | Not Available | Negative | 4377587 - 4378189 | 20495.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
