Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 1, cut1 family (tc 3.a.1.1.-) | SAMN04488094_11825 | Not Available | Positive | 4359672 - 4360607 | 34619.6 |
| carbohydrate abc transporter membrane protein 2, cut1 family (tc 3.a.1.1.-) | SAMN04488094_11826 | Not Available | Positive | 4360613 - 4361446 | 30750.4 |
| multiple sugar transport system atp-binding protein | SAMN04488094_11827 | Not Available | Positive | 4361464 - 4362609 | 41631.2 |
| beta-glucosidase | SAMN04488094_11828 | Not Available | Positive | 4362658 - 4365069 | 86216.2 |
| d-xylose isomerase | SAMN04488094_11829 | Not Available | Positive | 4365073 - 4366383 | 48940.9 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_11830 | Not Available | Negative | 4366494 - 4367396 | 33365.3 |
| cupin domain protein | SAMN04488094_11831 | Not Available | Positive | 4367533 - 4367928 | 14203.4 |
| hypothetical protein | SAMN04488094_11832 | Not Available | Positive | 4368019 - 4369035 | 36432.8 |
| acetate coa/acetoacetate coa-transferase alpha subunit | SAMN04488094_11833 | Not Available | Positive | 4369373 - 4370026 | 22539.8 |
| acetate coa/acetoacetate coa-transferase beta subunit | SAMN04488094_11834 | Not Available | Positive | 4370028 - 4370681 | 22595.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
