Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline-sulfatase | SAMN04488094_11815 | Not Available | Negative | 4347118 - 4348623 | 56938.0 |
| crea protein | SAMN04488094_11816 | Not Available | Positive | 4348773 - 4349246 | 17391.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN04488094_11817 | Not Available | Positive | 4349876 - 4350856 | 35442.4 |
| tripartite tricarboxylate transporter tctb family protein | SAMN04488094_11818 | Not Available | Positive | 4350939 - 4351424 | 17573.4 |
| putative tricarboxylic transport membrane protein | SAMN04488094_11819 | Not Available | Positive | 4351440 - 4352942 | 52493.8 |
| hypothetical protein | SAMN04488094_11820 | Not Available | Positive | 4353483 - 4354541 | 37064.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_11821 | Not Available | Positive | 4354694 - 4355590 | 33057.1 |
| hypothetical protein | SAMN04488094_11822 | Not Available | Negative | 4355985 - 4356602 | 22791.8 |
| transcriptional regulator, laci family | SAMN04488094_11823 | Not Available | Negative | 4356790 - 4357872 | 38685.5 |
| carbohydrate abc transporter substrate-binding protein, cut1 family (tc 3.a.1.1.-) | SAMN04488094_11824 | Not Available | Positive | 4358281 - 4359576 | 47095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
