Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein, parb family | SAMN04488094_11779 | Not Available | Negative | 4324167 - 4326407 | 81149.7 |
| replication initiation protein repc | SAMN04488094_11780 | Not Available | Negative | 4326473 - 4327441 | 35800.9 |
| chromosome partitioning protein, parb family | SAMN04488094_11781 | Not Available | Negative | 4327787 - 4328752 | 35291.1 |
| chromosome partitioning protein | SAMN04488094_11782 | Not Available | Negative | 4328752 - 4329954 | 44413.9 |
| site-specific dna recombinase | SAMN04488094_11783 | Not Available | Negative | 4330284 - 4331165 | 32730.5 |
| hth dna binding domain-containing protein | SAMN04488094_11784 | Not Available | Positive | 4331391 - 4332458 | 38871.3 |
| two-component system, citb family, response regulator/two-component system, citb family, response regulator dcur | SAMN04488094_1181 | Not Available | Negative | 4332914 - 4333053 | 5200.38 |
| two-component system, citb family, sensor histidine kinase dcus | SAMN04488094_1182 | Not Available | Negative | 4333050 - 4334696 | 59157.4 |
| chloramphenicol o-acetyltransferase type b | SAMN04488094_1183 | Not Available | Positive | 4335029 - 4335664 | 23644.9 |
| transcriptional regulator, deor family | SAMN04488094_1184 | Not Available | Negative | 4335762 - 4336550 | 28414.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
