Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, contains xre-family hth domain | SAMN04488094_11769 | Not Available | Positive | 4316253 - 4316816 | 20519.7 |
| phosphinothricin acetyltransferase | SAMN04488094_11770 | Not Available | Positive | 4316904 - 4317431 | 19740.3 |
| transporter family-2 protein | SAMN04488094_11771 | Not Available | Positive | 4317428 - 4317877 | 15289.4 |
| single-strand binding protein | SAMN04488094_11772 | Not Available | Negative | 4317946 - 4318350 | 15243.1 |
| hypothetical protein | SAMN04488094_11773 | Not Available | Positive | 4319294 - 4320010 | 26585.9 |
| zn-dependent peptidase imma, m78 family | SAMN04488094_11774 | Not Available | Positive | 4320040 - 4321248 | 45273.3 |
| hypothetical protein | SAMN04488094_11775 | Not Available | Positive | 4321263 - 4321457 | 7202.38 |
| hypothetical protein | SAMN04488094_11776 | Not Available | Negative | 4321735 - 4322667 | 35014.6 |
| hypothetical protein | SAMN04488094_11777 | Not Available | Negative | 4323041 - 4323205 | 5593.52 |
| hypothetical protein | SAMN04488094_11778 | Not Available | Negative | 4323595 - 4324068 | 16807.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
