Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN04488094_101214 | Not Available | Negative | 229000 - 230430 | 50731.6 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04488094_101215 | Not Available | Negative | 230441 - 231724 | 44901.9 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN04488094_101216 | Not Available | Negative | 231714 - 232709 | 35744.2 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN04488094_101217 | Not Available | Negative | 232721 - 233719 | 36786.4 |
| xaa-pro aminopeptidase | SAMN04488094_101218 | Not Available | Negative | 233808 - 235106 | 48545.7 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN04488094_101219 | Not Available | Negative | 235171 - 235977 | 29188.8 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN04488094_101220 | Not Available | Negative | 236008 - 237825 | 67584.6 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04488094_101221 | Not Available | Positive | 238050 - 239006 | 34145.0 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN04488094_101222 | Not Available | Positive | 239088 - 239885 | 27977.4 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488094_101223 | Not Available | Positive | 239971 - 240945 | 33907.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
