Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase, type i | SAMN04488094_11739 | Not Available | Negative | 4294285 - 4295052 | 27665.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488094_11740 | Not Available | Negative | 4295061 - 4295957 | 32302.6 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488094_11741 | Not Available | Negative | 4296140 - 4296970 | 29676.8 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN04488094_11742 | Not Available | Negative | 4297108 - 4297710 | 21573.9 |
| threonine/homoserine efflux transporter rhta | SAMN04488094_11743 | Not Available | Positive | 4298323 - 4299219 | 32156.4 |
| fructose-1,6-bisphosphatase | SAMN04488094_11744 | Not Available | Negative | 4299689 - 4300336 | 23196.7 |
| dna-binding transcriptional regulator, lrp family | SAMN04488094_11745 | Not Available | Negative | 4300529 - 4300993 | 17093.6 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04488094_11746 | Not Available | Positive | 4301104 - 4301724 | 21775.2 |
| res domain-containing protein | SAMN04488094_11747 | Not Available | Negative | 4301935 - 4302636 | 26022.4 |
| protein of unknown function | SAMN04488094_11748 | Not Available | Negative | 4302633 - 4303022 | 14147.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
